BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019E10LP1|AL427499
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig307 868 0.0
3x_Contig1127 709 0.0
>3x_Contig307
Length = 1772
Score = 868 bits (436), Expect = 0.0
Identities = 446/450 (99%)
Strand = Plus / Minus
Query: 1 taatgtcatccactggtatgtccaaataggtacgctttgttcttgtcttcttttcytcag 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 450 taatgacatccactggtatgtccaaataggtacgctttgttcttgtcttcttttcgtcag 391
Query: 61 tatcmatagactcyatggtgtcgggacgatcaaactttaacgagttactagttgatccgt 120
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tatcaatagactcgatggtgtcgggacgatcaaactttaacgagttactagttgatccgt 331
Query: 121 cagcctcatcgtcatcttcggctagatcaaacatttcgtcagtaatctcttttacagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cagcctcatcgtcatcttcggctagatcaaacatttcgtcagtaatctcttttacagata 271
Query: 181 ccagttcttcgttcttatttcgcgtactgacatcttcgtcgctatcttcaccaaaaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccagttcttcgttcttatttcgcgtactgacatcttcgtcgctatcttcaccaaaaagat 211
Query: 241 ctttgtcgaattctacatgctcgtgttcctctatcgaaatattctgagcgggagattcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctttgtcgaattctacatgctcgtgttcctctatcgaaatattctgagcgggagattcaa 151
Query: 301 aagcggtttccagttctactttacgctcagaactacctactgatgcgtcctttgagttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aagcggtttccagttctactttacgctcagaactacctactgatgcgtcctttgagttga 91
Query: 361 tattggatgtactatttattacatcctttttctcattccaaagatcgttctgaggtttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tattggatgtactatttattacatcctttttctcattccaaagatcgttctgaggtttta 31
Query: 421 cggaaggagtttctgttataatatcatcaa 450
||||||||||||||||||||||||||||||
Sbjct: 30 cggaaggagtttctgttataatatcatcaa 1
>3x_Contig1127
Length = 4949
Score = 709 bits (356), Expect = 0.0
Identities = 409/420 (97%), Gaps = 6/420 (1%)
Strand = Plus / Plus
Query: 573 tagagtattccggagamaacttaccattctctcccgttgaagatacgttattgctgttat 632
|||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tagagtattccggagaaaacataccattctctcccgttgaagatacgttaatgctgttat 60
Query: 633 tggccgaatgcttattaaacccttgaaactgatcagtaaatattcctcccgtacttaatg 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggccgaatgcttattaaacccttgaaactgatcagtaaatattcctcccgtacttaatg 120
Query: 693 ggttatgtccggttacagttcccatccctgcagatgttccaggcgttctgtaggccgaag 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttatgtccggttacagttcccatccctgcagatgttccaggcgttctgtaggccgaag 180
Query: 753 tgagtcttaactgtataaatccatctatcatatcgaaacaatcatctaactcaagctgcg 812
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgagttttaactgtataaatccatctatcatatcgaaacaatcatctaactcaagctgcg 240
Query: 813 gggatcttgaaaatgcagtatattgaggagtttgaacgtcagatgctgtttgtac-aaac 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 gggatcttgaaaatgcagtatattgaggagtttgaacgtcagatgctgtttgtacaaaac 300
Query: 872 agagacatgccggccagataacgaaattatttccttttggttcgtc-agataatgtgata 930
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 agagacatgccggccagataacgaaattatttccttttggttcgtcaagataatgtgata 360
Query: 931 ttgttggagtg-agccattc-aatkgttagcatttggaat-agcttta-ccatttcaaac 986
||||||||||| |||||||| ||| ||||||||||||||| ||||||| |||||||||||
Sbjct: 361 ttgttggagtgaagccattcaaatggttagcatttggaataagctttacccatttcaaac 420
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6608
Number of Sequences: 1807
Number of extensions: 6608
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 2
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)